Dokument: Understanding the dynamics of Plant - Bacteria - Bacteriophage interactions as a means to improve plant performance

Titel:Understanding the dynamics of Plant - Bacteria - Bacteriophage interactions as a means to improve plant performance
URL für Lesezeichen:https://docserv.uni-duesseldorf.de/servlets/DocumentServlet?id=68000
URN (NBN):urn:nbn:de:hbz:061-20250116-104438-2
Kollektion:Dissertationen
Sprache:Englisch
Dokumententyp:Wissenschaftliche Abschlussarbeiten » Dissertation
Medientyp:Text
Autor: Erdrich, Sebastian Hermann [Autor]
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Dateien vom 18.12.2024 / geändert 18.12.2024
Beitragende:Prof. Dr. Schurr, Ulrich [Gutachter]
Prof. Dr. Frunzke, Julia [Gutachter]
Stichwörter:Bacteriophage, Plant biocontrol, Xanthomonas, seed coating
Dewey Dezimal-Klassifikation:500 Naturwissenschaften und Mathematik » 570 Biowissenschaften; Biologie
Beschreibung:Plant protection is crucial in the context of a secure food supply. With antibiotic-resistant
bacteria on the rise, we explore new, sustainable plant protection strategies and utilise nat
urally occurring bacterial viruses to counter pathogenic bacteria. These viruses, known as
bacteriophages, are highly specific and outnumber bacteria by a factor of ten, and are present
in every habitat on Earth. Despite their abundance, the number of available isolates for plant
pathogenic bacteria is still very limited. The bacterial genus of Xanthomonas contains many
well-known plant pathogens with the ability to infect some of the most important crop
plants, causing significant economic damage. Unfortunately, classical pest control strategies
are neither particularly efficient nor sustainable.
Investigating phage-based strategies, we set the foundation in our lab by isolating seven novel
Xanthomonas phages (Langgrundblatt1, Langgrundblatt2, Pfeifenkraut, Laurilin, Elanor,
Mallos, and Seregon). As part of this PhD project, we further characterised, classified and
tested them for their biocontrol potential in vitro. Besides good prerequisites for subsequent
in planta experiments, we established four taxonomic novel genera.
With seeds being one of the major transmission routes for bacterial pathogens in agriculture,
we tested strategies to protect plants from the early stages. Therefore, phages for two im
portant crop pathogens, Pseudomonas syringae and Agrobacterium fabrum (tumefaciens),
were isolated and tested for their interaction with the seed coat mucilage, deepening the
understanding of seed-based biocontrol. Some of the tested phages were highly dependent
on mucilage for seed binding, whereas podophage Athelas showed the highest dependency.
The significance of this observation was broadened by testing further podoviruses of the
Autographiviridae family obtained from the systematic E. coli (BASEL) phage collection.
These showed a similar dependence on the mucilage for seed adhesion.
Phage coating effectively increased the survival rate of plant seedlings in the presence of
the pathogen. Long-term activity tests revealed a high stability of phages on seed sur
faces. The utilisation of non-virulent host strains was further successfully applied to enrich
the presence of infectious phage particles on seed surfaces. Altogether, our study highlights
the potential of phage-based applications as sustainable biocontrol strategy at the seed level.
A further part of this work aimed at gaining a molecular understanding of the tripartite
interaction between plants, bacteria, and phages in a novel tripartite transcriptomics ap
proach. We aimed to fill the knowledge gap on how the plants gene expression is responding
during phage-based biocontrol. For this purpose, a gnotobiotic system was used to study
infection of Arabidopsis thaliana with the plant pathogen Xanthomonas campestris. Here,
the application of the Xanthomonas phage Seregon could successfully counteract the bac
terial infection almost to the level of the uninfected control. Additionally, we observed
a significant variation in the expression of defence-related genes throughout the tripartite
interaction. While X. campestris inoculation led to expression of several salicylic acid respon
sive genes like WRKY70 and WAK1, the treatment of X. campestris with phage Seregon
led to a significantly reduced upregulation of these genes. We also identified GRP3.1 as
uniquely upregulated in response to phage-based control of X. campestris. In summary, this
thesis offers unprecedented insights into the molecular-level tripartite interactions between
plants, bacteria, and phages, thereby establishing a crucial foundation for the development
of sustainable biocontrol strategies in agriculture utilizing phages.
Lizenz:Creative Commons Lizenzvertrag
Dieses Werk ist lizenziert unter einer Creative Commons Namensnennung 4.0 International Lizenz
Fachbereich / Einrichtung:Mathematisch- Naturwissenschaftliche Fakultät
Dokument erstellt am:16.01.2025
Dateien geändert am:16.01.2025
Promotionsantrag am:26.06.2024
Datum der Promotion:29.07.2024
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